PPCS-CM5-2025/PPCS-CM3-2025/docker-compose.yml

# docker swarm init, then you have to do // note version_mpinet is the name of the overlay
# on veut --driver=bridge 
# NAT simple, non multinoeud (pas d'overlay)
# docker network create --attachable yml_mpinet
# Dec, 12, 2025 - Jean-Michel Batto

services:
  grafana:
    container_name: influxdb_local
    image: philhawthorne/docker-influxdb-grafana:latest
    volumes:
      - /var/run/docker.sock:/var/run/docker.sock
      - usrlocalinfluxdb-foo:/var/lib/influxdb
      - usrlocalgrafana-foo:/var/lib/grafana
    ports: 
      - "3003:3003"
      - "3004:8083"
      - "8086:8086"
    networks:
      - mpinet
  mysql:
    image: mariadb:10.10
    hostname: mysql
    container_name: mysql
    environment:
      MARIADB_ROOT_PASSWORD: password
      MARIADB_DATABASE: slurm_acct_db
      MARIADB_USER: slurm
      MARIADB_PASSWORD: password
    volumes:
      - var_lib_mysql:/var/lib/mysql
    ports:
      - "3306:3306"
    networks:
      - mpinet
  slurmdbd:
    image: jmbatto/m2chps-mpi41-slurm:latest
    container_name: slurmdbd
    hostname: slurmdbd
    volumes:
      - /var/run/docker.sock:/var/run/docker.sock
      - etc_munge:/etc/munge
      #      - etc_slurm:/etc/slurm
      - var_log_slurm:/var/log/slurm
    environment:
      - SLURMPARAM=slurmdbd
    expose:
      - "6819"
    healthcheck:
      test: ["CMD-SHELL", "netstat -tuln | grep 6819 || /bin/bash -c 'echo \"/usr/sbin/slurmdbd -Dvvv\" | grep slurmdbd'"]
      interval: 10s
      timeout: 5s
      retries: 10
      start_period: 20s
    depends_on:
      - mysql
    shm_size: "512m"
    secrets:
      - source: "id_rsa"
        target: "/home/mpiuser/.ssh-source/id_rsa"
      - source: "id_rsa_mpi_pub"
        target: "/home/mpiuser/.ssh-source/id_rsa.pub"
      - source: "authorized_keys"
        target: "/home/mpiuser/.ssh-source/authorized_keys"
    networks:
      - mpinet
  slurmctld:
    image: jmbatto/m2chps-mpi41-slurm:latest
    container_name: slurmctld
    hostname: slurmctld
    volumes:
      - /var/run/docker.sock:/var/run/docker.sock
      - etc_munge:/etc/munge
      #      - etc_slurm:/etc/slurm
      - slurm_jobdir:/data
      - var_log_slurm:/var/log/slurm
      - usrlocalvarmpi-foo:/usr/local/var/mpishare
    environment:
      - SLURMPARAM=slurmctld
    expose:
      - "6817"
    depends_on:
      slurmdbd:
        condition: service_healthy
    shm_size: "512m"
    secrets:
      - source: "id_rsa"
        target: "/home/mpiuser/.ssh-source/id_rsa"
      - source: "id_rsa_mpi_pub"
        target: "/home/mpiuser/.ssh-source/id_rsa.pub"
      - source: "authorized_keys"
        target: "/home/mpiuser/.ssh-source/authorized_keys"
    networks:
      - mpinet
  c1:
    image: jmbatto/m2chps-mpi41-slurm:latest
    hostname: c1
    container_name: c1
    volumes:
      - /var/run/docker.sock:/var/run/docker.sock
      - etc_munge:/etc/munge
      #      - etc_slurm:/etc/slurm
      - slurm_jobdir:/data
      - var_log_slurm:/var/log/slurm
      - usrlocalvarmpi-foo:/usr/local/var/mpishare
    environment:
      - SLURMPARAM=slurmd
    expose:
      - "6818"
    depends_on:
      - "slurmctld"
    shm_size: "512m"
    secrets:
      - source: "id_rsa"
        target: "/home/mpiuser/.ssh-source/id_rsa"
      - source: "id_rsa_mpi_pub"
        target: "/home/mpiuser/.ssh-source/id_rsa.pub"
      - source: "authorized_keys"
        target: "/home/mpiuser/.ssh-source/authorized_keys"
    networks:
      - mpinet
  c2:
    image: jmbatto/m2chps-mpi41-slurm:latest
    hostname: c2
    container_name: c2
    volumes:
      - /var/run/docker.sock:/var/run/docker.sock
      - etc_munge:/etc/munge
      #      - etc_slurm:/etc/slurm
      - slurm_jobdir:/data
      - var_log_slurm:/var/log/slurm
      - usrlocalvarmpi-foo:/usr/local/var/mpishare
    environment:
      - SLURMPARAM=slurmd
    expose:
      - "6818"
    depends_on:
      - "slurmctld"
    shm_size: "512m"
    networks:
      - mpinet
    secrets:
      - source: "id_rsa"
        target: "/home/mpiuser/.ssh-source/id_rsa"
      - source: "id_rsa_mpi_pub"
        target: "/home/mpiuser/.ssh-source/id_rsa.pub"
      - source: "authorized_keys"
        target: "/home/mpiuser/.ssh-source/authorized_keys"
  c3:
    image: jmbatto/m2chps-mpi41-slurm:latest
    hostname: c3
    container_name: c3
    volumes:
      - /var/run/docker.sock:/var/run/docker.sock
      - etc_munge:/etc/munge
      #      - etc_slurm:/etc/slurm
      - slurm_jobdir:/data
      - var_log_slurm:/var/log/slurm
      - usrlocalvarmpi-foo:/usr/local/var/mpishare
    environment:
      - SLURMPARAM=slurmd
    expose:
      - "6818"
    depends_on:
      - "slurmctld"
    shm_size: "512m"
    networks:
      - mpinet
    secrets:
      - source: "id_rsa"
        target: "/home/mpiuser/.ssh-source/id_rsa"
      - source: "id_rsa_mpi_pub"
        target: "/home/mpiuser/.ssh-source/id_rsa.pub"
      - source: "authorized_keys"
        target: "/home/mpiuser/.ssh-source/authorized_keys"
  c4:
    image: jmbatto/m2chps-mpi41-slurm:latest
    hostname: c4
    container_name: c4
    volumes:
      - /var/run/docker.sock:/var/run/docker.sock
      - etc_munge:/etc/munge
      #      - etc_slurm:/etc/slurm
      - slurm_jobdir:/data
      - var_log_slurm:/var/log/slurm
      - usrlocalvarmpi-foo:/usr/local/var/mpishare
    environment:
      - SLURMPARAM=slurmd
    expose:
      - "6818"
    depends_on:
      - "slurmctld"
    shm_size: "512m"
    networks:
      - mpinet
    secrets:
      - source: "id_rsa"
        target: "/home/mpiuser/.ssh-source/id_rsa"
      - source: "id_rsa_mpi_pub"
        target: "/home/mpiuser/.ssh-source/id_rsa.pub"
      - source: "authorized_keys"
        target: "/home/mpiuser/.ssh-source/authorized_keys"
  vscode:
    image: codercom/code-server:latest
    container_name: vscode
    hostname: vscode
    ports: 
      - "8081:8080" 
    deploy:
      mode: replicated
      replicas: 1
      resources:
       limits:
         memory: 512M
    restart: always
    volumes:
        - /var/run/docker.sock:/var/run/docker.sock
        - usrlocalvarmpi-foo:/usr/local/var/mpishare
        - usrlocalvarmpi-foo:/home/coder
    environment:
        - PASSWORD=1234
        - DOCKER_USER=mpiuser
        - CODER_ACCESS_URL="http://localhost:8081"
    user: "1001:1001"
    networks:
        - mpinet
    secrets:
      - source: "id_rsa"
        target: "/home/coder/.ssh-source/id_rsa"
      - source: "id_rsa_mpi_pub"
        target: "/home/coder/.ssh-source/id_rsa.pub"
      - source: "authorized_keys"
        target: "/home/coder/.ssh-source/authorized_keys"
      - source: "certif.sh"
        target: "/home/coder/.ssh-source/certif.sh"
      - source: "install_clang_format_go.sh"
        target: "/home/coder/.ssh-source/install_clang_format_go.sh"
secrets:
  id_rsa_mpi_pub:
    file: ssh/id_rsa.mpi.pub
  id_rsa:
    file: ssh/id_rsa.mpi
  authorized_keys:
    file: ssh/id_rsa.mpi.pub
  certif.sh:
    file: ssh/certif.sh
  install_clang_format_go.sh:
    file: ssh/install_clang_format_go.sh 
networks:
  mpinet:
    external: true
    name: yml_mpinet
    driver: overlay
volumes:
  etc_munge:
  #  etc_slurm:
  slurm_jobdir:
  var_lib_mysql:
  var_log_slurm:
  usrlocalvarmpi-foo:
  usrlocalgrafana-foo:
  usrlocalinfluxdb-foo: